AT2G45170 (ATG8E, ATATG8E)

Aliases : ATG8E, ATATG8E

Description : AUTOPHAGY 8E

Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G45170

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00225880	ATG8F,...	Vesicle trafficking.autophagosome formation.ATG8/ATG12...	0.03	OrthoFinder output from all 47 species
Ala_g16349	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.04	OrthoFinder output from all 47 species
Als_g31042	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species
Aop_g00128	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene30567.t1	ATG8F, Aspi01Gene30567	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene31996.t1	ATG8F, Aspi01Gene31996	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0002.g001324	ATG8E, ATATG8E	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.05	OrthoFinder output from all 47 species
Ceric.27G065300.1	ATG8F, Ceric.27G065300	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.04	OrthoFinder output from all 47 species
Ceric.33G046800.1	ATG8F, Ceric.33G046800	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.06	OrthoFinder output from all 47 species
Dac_g00086	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
Dac_g11854	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species
Gb_08297	ATG8C	ATG8 autophagosome ubiquitin-fold protein	0.03	OrthoFinder output from all 47 species
Msp_g03687	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.05	OrthoFinder output from all 47 species
Msp_g17208	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.05	OrthoFinder output from all 47 species
Msp_g25613	ATG8E, ATATG8E	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g05523	ATG8F	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.05	OrthoFinder output from all 47 species
Sam_g36881	No alias	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.04	OrthoFinder output from all 47 species
Sam_g39855	No alias	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.03	OrthoFinder output from all 47 species
Sam_g47972	No alias	autophagosome ubiquitin-fold protein *(ATG8) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005776	autophagosome	IDA	Interproscan
BP	GO:0006914	autophagy	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
MF	GO:0008017	microtubule binding	ISS	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009267	cellular response to starvation	IEP	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0001558	regulation of cell growth	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
MF	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005881	cytoplasmic microtubule	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0010039	response to iron ion	IEP	HCCA
BP	GO:0010350	cellular response to magnesium starvation	IEP	HCCA
BP	GO:0010555	response to mannitol	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0016032	viral process	IEP	HCCA
BP	GO:0018008	N-terminal peptidyl-glycine N-myristoylation	IEP	HCCA
BP	GO:0018201	peptidyl-glycine modification	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031111	negative regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031113	regulation of microtubule polymerization	IEP	HCCA
BP	GO:0031114	regulation of microtubule depolymerization	IEP	HCCA
BP	GO:0031115	negative regulation of microtubule polymerization	IEP	HCCA
BP	GO:0031117	positive regulation of microtubule depolymerization	IEP	HCCA
BP	GO:0031122	cytoplasmic microtubule organization	IEP	HCCA
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032026	response to magnesium ion	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032272	negative regulation of protein polymerization	IEP	HCCA
BP	GO:0032886	regulation of microtubule-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0035864	response to potassium ion	IEP	HCCA
BP	GO:0035865	cellular response to potassium ion	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
MF	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043622	cortical microtubule organization	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
BP	GO:0046794	transport of virus	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048640	negative regulation of developmental growth	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0051093	negative regulation of developmental process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0051511	negative regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0051592	response to calcium ion	IEP	HCCA
BP	GO:0062197	cellular response to chemical stress	IEP	HCCA
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071216	cellular response to biotic stimulus	IEP	HCCA
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	HCCA
BP	GO:0071241	cellular response to inorganic substance	IEP	HCCA
BP	GO:0071248	cellular response to metal ion	IEP	HCCA
BP	GO:0071280	cellular response to copper ion	IEP	HCCA
BP	GO:0071281	cellular response to iron ion	IEP	HCCA
BP	GO:0071286	cellular response to magnesium ion	IEP	HCCA
BP	GO:0071310	cellular response to organic substance	IEP	HCCA
BP	GO:0071322	cellular response to carbohydrate stimulus	IEP	HCCA
BP	GO:0071325	cellular response to mannitol stimulus	IEP	HCCA
BP	GO:0071470	cellular response to osmotic stress	IEP	HCCA
BP	GO:0071472	cellular response to salt stress	IEP	HCCA
BP	GO:0072708	response to sorbitol	IEP	HCCA
BP	GO:0072709	cellular response to sorbitol	IEP	HCCA
BP	GO:0075733	intracellular transport of virus	IEP	HCCA
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901881	positive regulation of protein depolymerization	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004241	Atg8-like	15	118

External Links

No external refs found!

AT2G45170 (ATG8E, ATATG8E)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation