1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G44410

AT2G44410


Description : RING/U-box superfamily protein


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G44410

Target Alias Description ECC score Gene Family Method Actions
Adi_g006491 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021123 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g027095 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0256.g060525 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g07622 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12398 No alias RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g61420.1 LOC_Os01g61420 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g09801 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
MF GO:0019798 procollagen-proline dioxygenase activity IEP HCCA
MF GO:0031543 peptidyl-proline dioxygenase activity IEP HCCA
MF GO:0031545 peptidyl-proline 4-dioxygenase activity IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA

No InterPro domains available for this sequence

No external refs found!