AT2G43080 (AT-P4H-1)

Aliases : AT-P4H-1

Description : P4H isoform 1

Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G43080

Target	Alias	Description	ECC score	Gene Family Method
AT4G33910	No alias	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase...	0.04	OrthoFinder output from all 47 species
Adi_g006427	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g022004	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g040528	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g040529	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g11608	No alias	prolyl hydroxylase & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g23481	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38007	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g41271	No alias	prolyl hydroxylase & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene61624.t1	Aspi01Gene61624	prolyl hydroxylase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0100.g044293	No alias	prolyl hydroxylase & original description: CDS=283-1209	0.05	OrthoFinder output from all 47 species
Cre01.g014650	AT-P4H-2	Protein modification.hydroxylation.prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
Cre03.g160200	No alias	Protein modification.hydroxylation.prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
Cre05.g244700	No alias	Protein modification.hydroxylation.prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
Dcu_g15095	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g04267	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g11274	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08310	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g06064	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g27361	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g11882	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000385	No alias	prolyl hydroxylase & original description: CDS=1-888	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007186	No alias	prolyl hydroxylase & original description: CDS=65-1096	0.02	OrthoFinder output from all 47 species
Solyc06g054490.3.1	Solyc06g054490	prolyl hydroxylase	0.03	OrthoFinder output from all 47 species
Zm00001e008483_P001	AT-P4H-1, Zm00001e008483	prolyl hydroxylase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004656	procollagen-proline 4-dioxygenase activity	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
BP	GO:0006486	protein glycosylation	None	Extended
BP	GO:0006487	protein N-linked glycosylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	ISS	Interproscan
BP	GO:0018126	protein hydroxylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IDA	Interproscan
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	ISS	Interproscan
BP	GO:0019511	peptidyl-proline hydroxylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019798	procollagen-proline dioxygenase activity	None	Extended
MF	GO:0031543	peptidyl-proline dioxygenase activity	None	Extended
MF	GO:0031545	peptidyl-proline 4-dioxygenase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0001944	vasculature development	IEP	HCCA
MF	GO:0004846	urate oxidase activity	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006896	Golgi to vacuole transport	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
MF	GO:0008477	purine nucleosidase activity	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
MF	GO:0008930	methylthioadenosine nucleosidase activity	IEP	HCCA
BP	GO:0009086	methionine biosynthetic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
CC	GO:0009331	glycerol-3-phosphate dehydrogenase complex	IEP	HCCA
MF	GO:0009940	amino-terminal vacuolar sorting propeptide binding	IEP	HCCA
MF	GO:0010209	vacuolar sorting signal binding	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0016663	oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
BP	GO:0019509	L-methionine salvage from methylthioadenosine	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0043102	amino acid salvage	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0052646	alditol phosphate metabolic process	IEP	HCCA
BP	GO:0071265	L-methionine biosynthetic process	IEP	HCCA
BP	GO:0071267	L-methionine salvage	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005123	Oxoglu/Fe-dep_dioxygenase	166	278

External Links

No external refs found!

AT2G43080 (AT-P4H-1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation