1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G42470

AT2G42470


Description : TRAF-like family protein


Gene families : OG0007645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007645_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42470

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.04 OrthoFinder output from all 47 species
AT1G31380 No alias TRAF-like family protein 0.09 OrthoFinder output from all 47 species
AT1G31390 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT1G31400 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT2G01790 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT2G05420 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT2G42455 No alias No description available 0.16 OrthoFinder output from all 47 species
AT2G42460 No alias TRAF-like family protein 0.08 OrthoFinder output from all 47 species
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.1 OrthoFinder output from all 47 species
AT3G44790 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT3G44805 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58210 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.06 OrthoFinder output from all 47 species
AT3G58300 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.03 OrthoFinder output from all 47 species
AT3G58320 No alias Ubiquitin-specific protease family C19-related protein 0.04 OrthoFinder output from all 47 species
AT3G58340 No alias TRAF-like family protein 0.16 OrthoFinder output from all 47 species
AT3G58370 No alias TRAF-like family protein 0.11 OrthoFinder output from all 47 species
AT3G58400 No alias TRAF-like family protein 0.02 OrthoFinder output from all 47 species
AT3G58440 No alias TRAF-like superfamily protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018126 protein hydroxylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP HCCA
BP GO:0019511 peptidyl-proline hydroxylation IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 40 150
IPR002083 MATH/TRAF_dom 496 615
No external refs found!