AT2G42030

Description : RING/U-box superfamily protein

Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G42030

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene19448.t1	Aspi01Gene19448	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0256.g060525	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g24563	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.04	OrthoFinder output from all 47 species
Smo402081	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species
Spa_g10344	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!