1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G41800

AT2G41800


Description : Protein of unknown function, DUF642


Gene families : OG0003264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41800

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G29980 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT1G80240 No alias Protein of unknown function, DUF642 0.04 OrthoFinder output from all 47 species
AT3G08030 No alias Protein of unknown function, DUF642 0.07 OrthoFinder output from all 47 species
AT4G32460 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT5G11420 No alias Protein of unknown function, DUF642 0.04 OrthoFinder output from all 47 species
Als_g12141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_04470 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_14930 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g42520.1 LOC_Os01g42520 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g55190.1 LOC_Os01g55190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g11040.1 LOC_Os02g11040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g59300.1 LOC_Os03g59300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41770.1 LOC_Os04g41770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g04050.1 LOC_Os07g04050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434741g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_169757g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_201516g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_251322g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_44504g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g070540.3.1 Solyc02g070540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g120040.3.1 Solyc03g120040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g015610.3.1 Solyc04g015610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e006089_P001 Zm00001e006089 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007711_P001 Zm00001e007711 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e007714_P001 Zm00001e007714 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020676_P001 Zm00001e020676 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005618 cell wall IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0015774 polysaccharide transport IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006946 DGR2-like_dom 32 188
IPR006946 DGR2-like_dom 199 366
No external refs found!