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  5. AT2G40925

AT2G40925


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40925
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G19160 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT1G48060 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G10990 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
MF GO:0030544 Hsp70 protein binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 227 358
IPR001810 F-box_dom 26 61
No external refs found!