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AT2G40820


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).


Gene families : OG0004003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004003_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40820

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g59130.1 LOC_Os01g59130 SCAB actin organisation regulator protein 0.05 OrthoFinder output from all 47 species
LOC_Os03g24940.2 LOC_Os03g24940 SCAB actin organisation regulator protein 0.02 OrthoFinder output from all 47 species
Mp4g04360.1 No alias SCAB actin organisation regulator protein 0.02 OrthoFinder output from all 47 species
Msp_g04504 No alias regulatory protein *(SCAB) of actin organisation &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032009 SCAB_CC 103 272
IPR032012 SCAB-ABD 57 99
No external refs found!