AT2G40380 (PRA1.B2)

Aliases : PRA1.B2

Description : prenylated RAB acceptor 1.B2

Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G40380

Target	Alias	Description	ECC score	Gene Family Method
AT1G55640	PRA1.G1	prenylated RAB acceptor 1.G1	0.04	OrthoFinder output from all 47 species
Adi_g066379	PRA1.B4	B-G-class Rab-GDF protein & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g05773	PRA1.B2	B-G-class Rab-GDF protein & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g15051	PRA1.B4	B-G-class Rab-GDF protein & original description: none	0.03	OrthoFinder output from all 47 species
Als_g13344	PRA1.B2	B-G-class Rab-GDF protein & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000020	No alias	B-G-class Rab-GDF protein & original description: CDS=1-606	0.05	OrthoFinder output from all 47 species
Dac_g45879	PRA1.B5	B-G-class Rab-GDF protein & original description: none	0.03	OrthoFinder output from all 47 species
Gb_07381	PRA1.B2	B-G-class Rab-GDF protein	0.04	OrthoFinder output from all 47 species
Gb_38741	PRA1.B1	B-G-class Rab-GDF protein	0.03	OrthoFinder output from all 47 species
Len_g00355	PRA1.B5	B-G-class Rab-GDF protein & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g32287	No alias	B-G-class Rab-GDF protein & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g61993	PRA1.F3, PRA8	B-G-class Rab-GDF protein & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011117	PRA1.B4	B-G-class Rab-GDF protein & original description: CDS=1-600	0.02	OrthoFinder output from all 47 species
Spa_g39132	PRA1.B5	B-G-class Rab-GDF protein & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e019411_P001	PRA1.B2, Zm00001e019411	B-G-class Rab-GDF protein	0.04	OrthoFinder output from all 47 species
Zm00001e023951_P001	PRA1.B2, Zm00001e023951	B-G-class Rab-GDF protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	IDA	Interproscan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004895	Prenylated_rab_accept_PRA1	42	185

External Links

No external refs found!

AT2G40380 (PRA1.B2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation