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AT2G39280


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0001869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G39280

Target Alias Description ECC score Gene Family Method Actions
Adi_g022435 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27558 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14611 No alias Rab GTPase-activating protein & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g04921 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019374_P002 Zm00001e019374 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006349 regulation of gene expression by genomic imprinting IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 235 457
No external refs found!