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AT2G38820


Description : Protein of unknown function (DUF506)


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38820

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g30375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre16.g694203 No alias No description available 0.02 OrthoFinder output from all 47 species
Lfl_g01755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g08409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c9_6250V3.1 Pp3c9_6250 Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
Sam_g11927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 144 260
IPR006502 PDDEXK-like 76 148
No external refs found!