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  5. AT2G38160

AT2G38160


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits to 731 proteins in 211 species: Archae - 0; Bacteria - 236; Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32; Other Eukaryotes - 91 (source: NCBI BLink).


Gene families : OG0001027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00238480 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g056545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11037 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g37153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09694 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15387.t1 Aspi01Gene15387 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15387.t2 Aspi01Gene15387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50342.t1 Aspi01Gene50342 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53602.t1 Aspi01Gene53602 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62723.t1 Aspi01Gene62723 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030034 No alias not classified & original description: CDS=497-2731 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053183 No alias not classified & original description: CDS=141-2147 0.02 OrthoFinder output from all 47 species
Cba_g07689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G044000.1 Ceric.04G044000 not classified & original description: pacid=50631815... 0.03 OrthoFinder output from all 47 species
Ceric.31G009200.1 Ceric.31G009200 not classified & original description: pacid=50574505... 0.08 OrthoFinder output from all 47 species
Dac_g38937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032844001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_23642 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g21557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_32839g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_73675g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_85160g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03038 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g18136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g38965 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020173 No alias not classified & original description: CDS=1-1482 0.04 OrthoFinder output from all 47 species
Sam_g26525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g096090.4.1 Solyc03g096090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g014490.4.1 Solyc09g014490 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Spa_g02724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0016570 histone modification RCA Interproscan
BP GO:0048449 floral organ formation RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044001 migration in host IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA

No InterPro domains available for this sequence

No external refs found!