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AT2G37925 (COPT4)


Aliases : COPT4

Description : copper transporter 4


Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37925

Target Alias Description ECC score Gene Family Method Actions
AT5G59040 COPT3 copper transporter 3 0.04 OrthoFinder output from all 47 species
Aob_g13098 COPT5 copper transporter *(COPT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49938.t1 COPT2, Aspi01Gene49938 copper transporter *(COPT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000920 COPT5 copper transporter *(COPT) & original description: CDS=1-738 0.03 OrthoFinder output from all 47 species
Ceric.13G063600.1 COPT5, Ceric.13G063600 copper transporter *(COPT) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G063800.1 COPT5, Ceric.13G063800 copper transporter *(COPT) & original description:... 0.05 OrthoFinder output from all 47 species
LOC_Os01g56430.1 COPT1, LOC_Os01g56430 copper cation channel (COPT). copper transporter (COPT) 0.02 OrthoFinder output from all 47 species
LOC_Os04g33900.1 COPT1, LOC_Os04g33900 copper cation channel (COPT). copper transporter (COPT) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26900.1 COPT5, LOC_Os09g26900 copper cation channel (COPT). copper transporter (COPT) 0.03 OrthoFinder output from all 47 species
Len_g26999 COPT5 copper transporter *(COPT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42407 COPT5 copper transporter *(COPT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g082080.1.1 COPT5, Solyc02g082080 copper cation channel (COPT). copper transporter (COPT) 0.03 OrthoFinder output from all 47 species
Solyc10g084980.3.1 COPT2, Solyc10g084980 copper cation channel (COPT). copper transporter (COPT) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity ISS Interproscan
BP GO:0006825 copper ion transport ISS Interproscan
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IGI Interproscan
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Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007274 Cop_transporter 92 134
IPR007274 Cop_transporter 33 75
No external refs found!