AT2G36480


Description : ENTH/VHS family protein


Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G36480

Target Alias Description ECC score Gene Family Method Actions
Ceric.39G023900.1 PCFS4, Ceric.39G023900 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Dcu_g09800 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Ehy_g07114 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
GSVIVT01012646001 PCFS4 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01033783001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
Gb_26268 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
LOC_Os09g39270.1 LOC_Os09g39270 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 OrthoFinder output from all 47 species
Len_g09019 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Lfl_g11409 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Lfl_g16594 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Mp8g18940.1 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Ore_g43016 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Sam_g12428 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Solyc09g009120.4.1 Solyc09g009120 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Solyc10g083590.2.1 Solyc10g083590 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Tin_g06139 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Zm00001e033620_P001 Zm00001e033620 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006310 DNA recombination RCA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010332 response to gamma radiation RCA Interproscan
BP GO:0031048 RNA-mediated heterochromatin formation RCA Interproscan
BP GO:0032204 regulation of telomere maintenance RCA Interproscan
BP GO:0043247 telomere maintenance in response to DNA damage RCA Interproscan
BP GO:0045132 meiotic chromosome segregation RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!