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Aliases : AGP30, ATAGP30
Description : arabinogalactan protein 30
Gene families : OG0001735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G33790 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00068p00169090 | evm_27.TU.AmTr_v1... | Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G54970 | RHS7, ATPRP1, PRP1 | proline-rich protein 1 | 0.08 | OrthoFinder output from all 47 species | |
| AT2G47530 | No alias | Pollen Ole e 1 allergen and extensin family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT3G09925 | No alias | Pollen Ole e 1 allergen and extensin family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT3G62680 | ATPRP3, PRP3 | proline-rich protein 3 | 0.08 | OrthoFinder output from all 47 species | |
| AT4G02270 | RHS13 | root hair specific 13 | 0.08 | OrthoFinder output from all 47 species | |
| AT5G05500 | No alias | Pollen Ole e 1 allergen and extensin family protein | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g13359 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g39886 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013920 | No alias | not classified & original description: CDS=174-731 | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.02G038400.1 | Ceric.02G038400 | not classified & original description: pacid=50585766... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.02G099000.1 | Ceric.02G099000 | not classified & original description: pacid=50584642... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G058200.1 | Ceric.13G058200 | not classified & original description: pacid=50635929... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.24G024000.1 | Ceric.24G024000 | not classified & original description: pacid=50629899... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G030400.1 | Ceric.24G030400 | not classified & original description: pacid=50628660... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G038000.1 | Ceric.31G038000 | not classified & original description: pacid=50574287... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.36G064400.1 | AGP31, Ceric.36G064400 | not classified & original description: pacid=50569173... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14368 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g29649 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21062 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028048001 | RHS13 | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028049001 | RHS13 | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g06940.1 | LOC_Os01g06940 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g06960.1 | LOC_Os01g06960 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g06980.1 | LOC_Os01g06980 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g06990.1 | LOC_Os01g06990 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g07010.1 | LOC_Os01g07010 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g07020.1 | LOC_Os01g07020 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g07030.1 | LOC_Os01g07030 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g07040.1 | LOC_Os01g07040 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g07050.1 | LOC_Os01g07050 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g07060.1 | LOC_Os01g07060 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g52650.1 | LOC_Os01g52650 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g52660.1 | LOC_Os01g52660 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g45460.1 | LOC_Os05g45460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g45480.1 | LOC_Os05g45480 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g39890.1 | LOC_Os10g39890 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| MA_17693g0020 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g07881 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10621 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo422149 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Smo422150 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Smo429316 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Smo431381 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Smo431382 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Smo449075 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g078050.4.1 | Solyc02g078050 | Pistil-specific extensin-like protein OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g078100.3.1 | Solyc02g078100 | Pistil-specific extensin-like protein OS=Nicotiana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g008590.4.1 | Solyc09g008590 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g075410.4.1 | Solyc09g075410 | cell wall glycoprotein | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03778 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g28710 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g41356 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g41357 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g41541 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g41974 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g45815 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g57403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002269_P001 | Zm00001e002269 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016825_P001 | Zm00001e016825 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019925_P001 | Zm00001e019925 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e019927_P001 | Zm00001e019927 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e028211_P001 | Zm00001e028211 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e032167_P001 | Zm00001e032167 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| BP | GO:0005513 | detection of calcium ion | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009593 | detection of chemical stimulus | IEP | HCCA |
| BP | GO:0009612 | response to mechanical stimulus | IEP | HCCA |
| MF | GO:0010294 | abscisic acid glucosyltransferase activity | IEP | HCCA |
| BP | GO:0010306 | rhamnogalacturonan II biosynthetic process | IEP | HCCA |
| BP | GO:0010393 | galacturonan metabolic process | IEP | HCCA |
| BP | GO:0010396 | rhamnogalacturonan II metabolic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
| BP | GO:0019722 | calcium-mediated signaling | IEP | HCCA |
| BP | GO:0019932 | second-messenger-mediated signaling | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| MF | GO:0035252 | UDP-xylosyltransferase activity | IEP | HCCA |
| MF | GO:0042285 | xylosyltransferase activity | IEP | HCCA |
| BP | GO:0045488 | pectin metabolic process | IEP | HCCA |
| BP | GO:0045489 | pectin biosynthetic process | IEP | HCCA |
| MF | GO:0046910 | pectinesterase inhibitor activity | IEP | HCCA |
| BP | GO:0051592 | response to calcium ion | IEP | HCCA |
| BP | GO:0051645 | Golgi localization | IEP | HCCA |
| BP | GO:0051646 | mitochondrion localization | IEP | HCCA |
| BP | GO:0052325 | cell wall pectin biosynthetic process | IEP | HCCA |
| BP | GO:0052546 | cell wall pectin metabolic process | IEP | HCCA |
| BP | GO:0060151 | peroxisome localization | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |