AT2G33090

Description : Transcription elongation factor (TFIIS) family protein

Gene families : OG0022428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0022428_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G33090
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G27780	No alias	Transcription factor IIS family protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0010304	PSII associated light-harvesting complex II catabolic process	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!