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  5. AT2G32540

AT2G32540 (CSLB04, ATCSLB4, ATCSLB04)


Aliases : CSLB04, ATCSLB4, ATCSLB04

Description : cellulose synthase-like B4


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G32540
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00225060 CSLB04, ATCSLB4,... Cellulose synthase-like protein H1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00200560 ATCSLE1, CSLE1,... Cellulose synthase-like protein E6 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Adi_g059427 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106354 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49400 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62563.t1 MUR10, ATCESA7,... glycosyltransferase *(CSLB/CSLH) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056584 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Cba_g67786 MUR10, ATCESA7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02982 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Dde_g38793 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Dde_g50099 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
GSVIVT01002911001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01004458001 ATCSLE1, CSLE1 Cellulose synthase-like protein E6 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Gb_09688 MUR10, ATCESA7,... Cellulose synthase A catalytic subunit 9 [UDP-forming]... 0.03 OrthoFinder output from all 47 species
LOC_Os09g30120.1 ATCSLE1, CSLE1,... Cellulose synthase-like protein E1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g12943 CESA8, LEW2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15265 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19942 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ppi_g22229 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Solyc07g051820.3.1 ATCSLB03,... Cellulose synthase-like protein H1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc08g005280.2.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Tin_g13995 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Zm00001e008117_P005 CSLB04, ATCSLB4,... D-glucan synthase (CSLH) 0.06 OrthoFinder output from all 47 species
Zm00001e035207_P001 ATCSLD3, KJK,... D-glucan synthase (CSLF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process ISS Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
MF GO:0016740 transferase activity ISS Interproscan
MF GO:0016757 glycosyltransferase activity ISS Interproscan
MF GO:0016759 cellulose synthase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005884 actin filament IEP HCCA
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
MF GO:0008465 glycerate dehydrogenase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
BP GO:0009854 oxidative photosynthetic carbon pathway IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0009970 cellular response to sulfate starvation IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP HCCA
CC GO:0010319 stromule IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019464 glycine decarboxylation via glycine cleavage system IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
BP GO:0046677 response to antibiotic IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048653 anther development IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 388 730
IPR005150 Cellulose_synth 95 374
No external refs found!