- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG0002235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G31940 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dcu_g06661 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g13275 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g099500.2.1 | Solyc12g099500 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000303 | response to superoxide | IEP | HCCA |
| BP | GO:0000305 | response to oxygen radical | IEP | HCCA |
| CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
| MF | GO:0003997 | acyl-CoA oxidase activity | IEP | HCCA |
| MF | GO:0004605 | phosphatidate cytidylyltransferase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006855 | xenobiotic transmembrane transport | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| BP | GO:0010262 | somatic embryogenesis | IEP | HCCA |
| BP | GO:0010583 | response to cyclopentenone | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| BP | GO:0031099 | regeneration | IEP | HCCA |
| MF | GO:0033612 | receptor serine/threonine kinase binding | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0042908 | xenobiotic transport | IEP | HCCA |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
| MF | GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding | IEP | HCCA |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |