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AT2G30710


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0006033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G30710

Target Alias Description ECC score Gene Family Method Actions
Aev_g13024 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.02 OrthoFinder output from all 47 species
Ala_g13783 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.02 OrthoFinder output from all 47 species
Als_g12753 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0486.g073431 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g486400 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dde_g02217 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.03 OrthoFinder output from all 47 species
Msp_g29406 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.02 OrthoFinder output from all 47 species
Pir_g10764 No alias Rab GTPase-activating protein *(RabGAP4) & original... 0.02 OrthoFinder output from all 47 species
Smo232091 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Solyc11g005010.3.1 Solyc11g005010 RAB-GTPase-activating protein (RAB-GAP) 0.05 OrthoFinder output from all 47 species
Zm00001e023599_P001 Zm00001e023599 RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006898 receptor-mediated endocytosis IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
CC GO:0045334 clathrin-coated endocytic vesicle IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0072583 clathrin-dependent endocytosis IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 148 392
No external refs found!