AT2G28970

Description : Leucine-rich repeat protein kinase family protein

Gene families : OG0002433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002433_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28970
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00201700	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.05	OrthoFinder output from all 47 species
AT1G51790	No alias	Leucine-rich repeat protein kinase family protein	0.12	OrthoFinder output from all 47 species
AT1G51800	No alias	Leucine-rich repeat protein kinase family protein	0.1	OrthoFinder output from all 47 species
AT1G51805	No alias	Leucine-rich repeat protein kinase family protein	0.08	OrthoFinder output from all 47 species
AT1G51820	No alias	Leucine-rich repeat protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT1G51830	No alias	Leucine-rich repeat protein kinase family protein	0.1	OrthoFinder output from all 47 species
AT1G51840	No alias	protein kinase-related	0.11	OrthoFinder output from all 47 species
AT1G51870	No alias	protein kinase family protein	0.09	OrthoFinder output from all 47 species
AT1G51880	RHS6	root hair specific 6	0.09	OrthoFinder output from all 47 species
AT1G51890	No alias	Leucine-rich repeat protein kinase family protein	0.09	OrthoFinder output from all 47 species
AT2G19190	FRK1	FLG22-induced receptor-like kinase 1	0.1	OrthoFinder output from all 47 species
AT3G46340	No alias	Leucine-rich repeat protein kinase family protein	0.13	OrthoFinder output from all 47 species
AT3G46350	No alias	Leucine-rich repeat protein kinase family protein	0.13	OrthoFinder output from all 47 species
AT3G46400	No alias	Leucine-rich repeat protein kinase family protein	0.1	OrthoFinder output from all 47 species
AT3G46410	No alias	Protein kinase superfamily protein	0.02	OrthoFinder output from all 47 species
AT3G46420	No alias	Leucine-rich repeat protein kinase family protein	0.11	OrthoFinder output from all 47 species
AT4G20450	No alias	Leucine-rich repeat protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT4G29180	RHS16	root hair specific 16	0.09	OrthoFinder output from all 47 species
AT5G59670	No alias	Leucine-rich repeat protein kinase family protein	0.09	OrthoFinder output from all 47 species
GSVIVT01016917001	No alias	Putative leucine-rich repeat receptor-like protein...	0.06	OrthoFinder output from all 47 species
GSVIVT01016934001	No alias	Senescence-induced receptor-like...	0.05	OrthoFinder output from all 47 species
GSVIVT01016937001	No alias	Probable LRR receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
GSVIVT01016943001	No alias	Senescence-induced receptor-like...	0.05	OrthoFinder output from all 47 species
GSVIVT01016948001	No alias	Putative leucine-rich repeat receptor-like...	0.06	OrthoFinder output from all 47 species
Gb_41623	No alias	Putative leucine-rich repeat receptor-like protein...	0.04	OrthoFinder output from all 47 species
LOC_Os01g03370.1	LOC_Os01g03370	Probable LRR receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
LOC_Os01g59570.1	LOC_Os01g59570	Senescence-induced receptor-like...	0.05	OrthoFinder output from all 47 species
LOC_Os05g44930.1	LOC_Os05g44930	Putative leucine-rich repeat receptor-like protein...	0.05	OrthoFinder output from all 47 species
LOC_Os05g44990.1	LOC_Os05g44990	Senescence-induced receptor-like...	0.05	OrthoFinder output from all 47 species
LOC_Os05g45010.1	RHS6, LOC_Os05g45010	Probable LRR receptor-like serine/threonine-protein...	0.01	OrthoFinder output from all 47 species
LOC_Os09g09220.1	LOC_Os09g09220	Receptor-like protein kinase At3g21340 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os09g18020.1	RHS6, LOC_Os09g18020	Probable LRR receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
LOC_Os09g18260.1	LOC_Os09g18260	Probable LRR receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
LOC_Os09g19229.1	LOC_Os09g19229	Probable LRR receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
LOC_Os09g19500.1	LOC_Os09g19500	Probable LRR receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
LOC_Os12g37980.1	LOC_Os12g37980	Probable LRR receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
Pir_g24259	RHS16	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc03g093380.2.1	Solyc03g093380	Putative leucine-rich repeat receptor-like protein...	0.03	OrthoFinder output from all 47 species
Solyc03g121230.3.1	Solyc03g121230	Putative leucine-rich repeat receptor-like protein...	0.1	OrthoFinder output from all 47 species
Solyc06g062450.3.1	Solyc06g062450	Putative leucine-rich repeat receptor-like protein...	0.1	OrthoFinder output from all 47 species
Zm00001e013674_P003	Zm00001e013674	Probable LRR receptor-like serine/threonine-protein...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
BP	GO:0006468	protein phosphorylation	ISS	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007166	cell surface receptor signaling pathway	None	Extended
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	None	Extended
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010197	polar nucleus fusion	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
MF	GO:0015114	phosphate ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	HCCA
BP	GO:0015695	organic cation transport	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0080181	lateral root branching	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024788	Malectin-like_Carb-bd_dom	90	252
IPR024788	Malectin-like_Carb-bd_dom	28	88
IPR001611	Leu-rich_rpt	312	368
IPR000719	Prot_kinase_dom	482	746

External Links

No external refs found!

AT2G28970

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation