AT2G28960

Description : Leucine-rich repeat protein kinase family protein

Gene families : OG0002433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002433_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28960
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00190910	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.02	OrthoFinder output from all 47 species
AMTR_s00056p00201700	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.05	OrthoFinder output from all 47 species
AT1G51790	No alias	Leucine-rich repeat protein kinase family protein	0.1	OrthoFinder output from all 47 species
AT1G51800	No alias	Leucine-rich repeat protein kinase family protein	0.07	OrthoFinder output from all 47 species
AT1G51805	No alias	Leucine-rich repeat protein kinase family protein	0.15	OrthoFinder output from all 47 species
AT1G51830	No alias	Leucine-rich repeat protein kinase family protein	0.04	OrthoFinder output from all 47 species
AT1G51850	No alias	Leucine-rich repeat protein kinase family protein	0.05	OrthoFinder output from all 47 species
AT1G51890	No alias	Leucine-rich repeat protein kinase family protein	0.07	OrthoFinder output from all 47 species
AT2G04300	No alias	Leucine-rich repeat protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT2G19190	FRK1	FLG22-induced receptor-like kinase 1	0.07	OrthoFinder output from all 47 species
AT3G46370	No alias	Leucine-rich repeat protein kinase family protein	0.01	OrthoFinder output from all 47 species
AT3G46400	No alias	Leucine-rich repeat protein kinase family protein	0.06	OrthoFinder output from all 47 species
AT4G20450	No alias	Leucine-rich repeat protein kinase family protein	0.05	OrthoFinder output from all 47 species
AT4G29180	RHS16	root hair specific 16	0.05	OrthoFinder output from all 47 species
AT5G16900	No alias	Leucine-rich repeat protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT5G59670	No alias	Leucine-rich repeat protein kinase family protein	0.11	OrthoFinder output from all 47 species
GSVIVT01016917001	No alias	Putative leucine-rich repeat receptor-like protein...	0.06	OrthoFinder output from all 47 species
GSVIVT01016934001	No alias	Senescence-induced receptor-like...	0.05	OrthoFinder output from all 47 species
GSVIVT01016937001	No alias	Probable LRR receptor-like serine/threonine-protein...	0.06	OrthoFinder output from all 47 species
GSVIVT01016943001	No alias	Senescence-induced receptor-like...	0.05	OrthoFinder output from all 47 species
GSVIVT01016948001	No alias	Putative leucine-rich repeat receptor-like...	0.02	OrthoFinder output from all 47 species
Gb_41623	No alias	Putative leucine-rich repeat receptor-like protein...	0.06	OrthoFinder output from all 47 species
LOC_Os01g59570.1	LOC_Os01g59570	Senescence-induced receptor-like...	0.03	OrthoFinder output from all 47 species
LOC_Os05g44930.1	LOC_Os05g44930	Putative leucine-rich repeat receptor-like protein...	0.03	OrthoFinder output from all 47 species
LOC_Os05g45010.1	RHS6, LOC_Os05g45010	Probable LRR receptor-like serine/threonine-protein...	0.01	OrthoFinder output from all 47 species
LOC_Os09g09220.1	LOC_Os09g09220	Receptor-like protein kinase At3g21340 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os09g19229.1	LOC_Os09g19229	Probable LRR receptor-like serine/threonine-protein...	0.02	OrthoFinder output from all 47 species
LOC_Os09g19500.1	LOC_Os09g19500	Probable LRR receptor-like serine/threonine-protein...	0.04	OrthoFinder output from all 47 species
LOC_Os12g37980.1	LOC_Os12g37980	Probable LRR receptor-like serine/threonine-protein...	0.05	OrthoFinder output from all 47 species
Pir_g24259	RHS16	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Solyc03g121230.3.1	Solyc03g121230	Putative leucine-rich repeat receptor-like protein...	0.09	OrthoFinder output from all 47 species
Solyc06g062450.3.1	Solyc06g062450	Putative leucine-rich repeat receptor-like protein...	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010043	response to zinc ion	RCA	Interproscan
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004031	aldehyde oxidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006537	glutamate biosynthetic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009687	abscisic acid metabolic process	IEP	HCCA
BP	GO:0009688	abscisic acid biosynthetic process	IEP	HCCA
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
MF	GO:0016040	glutamate synthase (NADH) activity	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016639	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0018488	aryl-aldehyde oxidase activity	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019676	ammonia assimilation cycle	IEP	HCCA
BP	GO:0019740	nitrogen utilization	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0031226	obsolete intrinsic component of plasma membrane	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042126	nitrate metabolic process	IEP	HCCA
BP	GO:0042128	nitrate assimilation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043288	apocarotenoid metabolic process	IEP	HCCA
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0045036	protein targeting to chloroplast	IEP	HCCA
MF	GO:0045181	glutamate synthase activity, NAD(P)H as acceptor	IEP	HCCA
MF	GO:0050302	indole-3-acetaldehyde oxidase activity	IEP	HCCA
BP	GO:0062197	cellular response to chemical stress	IEP	HCCA
BP	GO:0071369	cellular response to ethylene stimulus	IEP	HCCA
BP	GO:0071470	cellular response to osmotic stress	IEP	HCCA
BP	GO:0071472	cellular response to salt stress	IEP	HCCA
BP	GO:0071941	nitrogen cycle metabolic process	IEP	HCCA
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	HCCA
BP	GO:0072598	protein localization to chloroplast	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1902644	tertiary alcohol metabolic process	IEP	HCCA
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	HCCA
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024788	Malectin-like_Carb-bd_dom	35	352
IPR000719	Prot_kinase_dom	576	840
IPR001611	Leu-rich_rpt	412	468

External Links

No external refs found!

AT2G28960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation