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AT2G28840 (XBAT31)


Aliases : XBAT31

Description : XB3 ortholog 1 in Arabidopsis thaliana


Gene families : OG0000851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28840

Target Alias Description ECC score Gene Family Method Actions
Als_g18495 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32709 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G048700.1 XBAT31, Ceric.04G048700 E3 ubiquitin ligase *(XBAT3) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g19831 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08553 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015667 XBAT31 not classified & original description: CDS=1-597 0.03 OrthoFinder output from all 47 species
Smo86281 XBAT31 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0051049 regulation of transport RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 195 220
IPR020683 DUF3447 112 182
IPR020683 DUF3447 45 109
No external refs found!