AT2G27800

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G27800
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AT1G71060	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT3G22670	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.04	OrthoFinder output from all 47 species
Nbi_g21055	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g19754	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	361	389
IPR002885	Pentatricopeptide_repeat	391	418
IPR002885	Pentatricopeptide_repeat	208	255
IPR002885	Pentatricopeptide_repeat	286	335

External Links

No external refs found!