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AT2G27630


Description : Ubiquitin carboxyl-terminal hydrolase-related protein


Gene families : OG0012900 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G27630
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G65110 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.04 OrthoFinder output from all 47 species
AT1G65120 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.01 OrthoFinder output from all 47 species
AT2G34230 No alias Protein with domains of unknown function (DUF627 and DUF629) 0.05 OrthoFinder output from all 47 species
AT2G34240 No alias Protein with domains of unknown function DUF627 and DUF632 0.01 OrthoFinder output from all 47 species
AT5G61940 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.05 OrthoFinder output from all 47 species
AT5G61950 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009662 etioplast organization IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
CC GO:0031359 obsolete integral component of chloroplast outer membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
InterPro domains Description Start Stop
IPR006865 DUF629 196 644
IPR006866 DUF627_N 18 125
No external refs found!