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AT2G25410


Description : RING/U-box superfamily protein


Gene families : OG0012518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25410
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT5G36001 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01001021001 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01005786001 No alias Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027094001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01038700001 No alias Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g095830.3.1 Solyc01g095830 Putative RING-H2 finger protein ATL21A OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Solyc01g095840.2.1 Solyc01g095840 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc01g095850.1.1 Solyc01g095850 Putative RING-H2 finger protein ATL21A OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc01g095860.3.1 Solyc01g095860 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc08g082310.3.1 Solyc08g082310 Putative RING-H2 finger protein ATL21A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP HCCA
MF GO:0004064 arylesterase activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0008493 tetracycline transmembrane transporter activity IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015665 alcohol transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0080160 selenate transport IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 327 369
No external refs found!