AT2G25140 (CLPB4, CLPB-M, HSP98.7)

Aliases : CLPB4, CLPB-M, HSP98.7

Description : casein lytic proteinase B4

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G25140
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00086p00119290	ATHSP101, HOT1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Aev_g01489	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.06	OrthoFinder output from all 47 species
Als_g09213	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g38181	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g49540	CLPB3, CLPB-P, APG6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11015	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g13437	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.1	OrthoFinder output from all 47 species
Aspi01Gene47646.t1	ATHSP101, HOT1,...	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0176.g056069	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description:...	0.06	OrthoFinder output from all 47 species
Cba_g03169	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07816	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.30G013400.1	SAG15, CLPD,...	chaperone component *(ClpD) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Cre11.g467644	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.05	OrthoFinder output from all 47 species
Dac_g01014	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.12	OrthoFinder output from all 47 species
Dac_g05146	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.09	OrthoFinder output from all 47 species
Dac_g11203	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g14071	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.08	OrthoFinder output from all 47 species
Dcu_g13807	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.08	OrthoFinder output from all 47 species
Dcu_g40536	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g06117	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g14780	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g23626	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g29771	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01007880001	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.13	OrthoFinder output from all 47 species
GSVIVT01011496001	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.12	OrthoFinder output from all 47 species
GSVIVT01035900001	CLPB4, CLPB-M, HSP98.7	External stimuli response.temperature.Hsp...	0.11	OrthoFinder output from all 47 species
Gb_21271	ATHSP101, HOT1, HSP101	cytosolic chaperone (Hsp101)	0.02	OrthoFinder output from all 47 species
Gb_39383	ATHSP101, HOT1, HSP101	cytosolic chaperone (Hsp101)	0.06	OrthoFinder output from all 47 species
LOC_Os02g08490.1	CLPB4, CLPB-M,...	organellar chaperone (Clp-p\|Clp-m)	0.16	OrthoFinder output from all 47 species
LOC_Os02g32520.1	SAG15, CLPD,...	chaperone component ClpD of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
LOC_Os03g31300.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.15	OrthoFinder output from all 47 species
LOC_Os05g44340.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.15	OrthoFinder output from all 47 species
Lfl_g18023	SAG15, CLPD, ERD1	chaperone component *(ClpD) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Lfl_g23098	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_21130g0010	ATHSP101, HOT1, HSP101	Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Mp1g16450.1	ATHSP101, HOT1, HSP101	cytosolic chaperone (Hsp101)	0.03	OrthoFinder output from all 47 species
Mp3g09010.1	CLPB3, CLPB-P, APG6	organellar chaperone (Clp-p\|Clp-m)	0.03	OrthoFinder output from all 47 species
Msp_g48913	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g09665	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09666	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g12640	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.14	OrthoFinder output from all 47 species
Ore_g34647	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g31360	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c19_4790V3.1	ATHSP101, HOT1,...	heat shock protein 101	0.04	OrthoFinder output from all 47 species
Ppi_g10767	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.07	OrthoFinder output from all 47 species
Ppi_g43633	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g52861	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Smo170696	ATHSP101, HOT1, HSP101	External stimuli response.temperature.Hsp...	0.09	OrthoFinder output from all 47 species
Smo174539	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.1	OrthoFinder output from all 47 species
Smo411118	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.13	OrthoFinder output from all 47 species
Smo418380	CLPB3, CLPB-P, APG6	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Solyc02g088610.4.1	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.08	OrthoFinder output from all 47 species
Solyc03g115230.3.1	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.08	OrthoFinder output from all 47 species
Solyc06g011370.4.1	CLPB4, CLPB-M,...	Chaperone protein ClpB3, mitochondrial OS=Oryza sativa...	0.09	OrthoFinder output from all 47 species
Solyc06g011380.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
Solyc06g011400.2.1	CLPB4, CLPB-M,...	Chaperone protein ClpB4, mitochondrial OS=Arabidopsis...	0.1	OrthoFinder output from all 47 species
Spa_g08654	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.1	OrthoFinder output from all 47 species
Spa_g18896	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g32620	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g46726	ATHSP101, HOT1, HSP101	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Tin_g04164	ATHSP101, HOT1, HSP101	cytosolic chaperone *(Hsp101) & original description: none	0.09	OrthoFinder output from all 47 species
Zm00001e002026_P002	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.15	OrthoFinder output from all 47 species
Zm00001e013843_P002	CLPB4, CLPB-M,...	organellar chaperone (Clp-p\|Clp-m)	0.02	OrthoFinder output from all 47 species
Zm00001e032223_P001	ATHSP101, HOT1,...	cytosolic chaperone (Hsp101)	0.12	OrthoFinder output from all 47 species
Zm00001e038056_P001	CLPB3, CLPB-P,...	organellar chaperone (Clp-p\|Clp-m)	0.13	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006457	protein folding	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	ISS	Interproscan
BP	GO:0009408	response to heat	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	RCA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0002020	protease binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004619	phosphoglycerate mutase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0005527	macrolide binding	IEP	HCCA
MF	GO:0005528	FK506 binding	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005788	endoplasmic reticulum lumen	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009687	abscisic acid metabolic process	IEP	HCCA
BP	GO:0009688	abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010118	stomatal movement	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0010942	positive regulation of cell death	IEP	HCCA
BP	GO:0012502	induction of programmed cell death	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
CC	GO:0016363	nuclear matrix	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
BP	GO:0034605	cellular response to heat	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043068	positive regulation of programmed cell death	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043288	apocarotenoid metabolic process	IEP	HCCA
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	HCCA
BP	GO:0043335	protein unfolding	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
MF	GO:0046537	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070370	cellular heat acclimation	IEP	HCCA
CC	GO:0071944	cell periphery	IEP	HCCA
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
BP	GO:1902644	tertiary alcohol metabolic process	IEP	HCCA
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	99	150
IPR004176	Clp_R_dom	176	226
IPR019489	Clp_ATPase_C	857	936
IPR003959	ATPase_AAA_core	285	419
IPR003959	ATPase_AAA_core	681	850

External Links

No external refs found!

AT2G25140 (CLPB4, CLPB-M, HSP98.7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation