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  5. AT2G24100

AT2G24100


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).


Gene families : OG0002542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G24100
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Ehy_g09117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10692g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g35672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024727 No alias not classified & original description: CDS=467-2359 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005245 voltage-gated calcium channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
BP GO:0010962 regulation of glucan biosynthetic process IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP HCCA
BP GO:0032950 regulation of beta-glucan metabolic process IEP HCCA
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP HCCA
BP GO:0032952 regulation of (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0032953 regulation of (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0042304 regulation of fatty acid biosynthetic process IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
BP GO:0080140 regulation of jasmonic acid metabolic process IEP HCCA
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!