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  5. AT2G23160

AT2G23160


Description : F-box family protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G23160

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G30920 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.13 OrthoFinder output from all 47 species
AT1G30930 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.1 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.11 OrthoFinder output from all 47 species
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.08 OrthoFinder output from all 47 species
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G55947 No alias No description available 0.03 OrthoFinder output from all 47 species
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.11 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.15 OrthoFinder output from all 47 species
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G47140 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT4G13060 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G44220 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.11 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 8 46
IPR013187 F-box-assoc_dom_typ3 207 307
No external refs found!