AT2G22170

Description : Lipase/lipooxygenase, PLAT/LH2 family protein

Gene families : OG0003401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22170
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00180790	evm_27.TU.AmTr_v1...	PLAT domain-containing protein 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00111p00038250	evm_27.TU.AmTr_v1...	PLAT domain-containing protein 1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Aev_g20864	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g17040	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_132224g0010	No alias	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
Mp5g16580.1	No alias	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Mp5g16600.1	No alias	PLAT domain-containing protein 2 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Mp8g00030.1	No alias	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Mpzg00240.1	No alias	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Mpzg00270.1	No alias	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Mpzg00290.1	No alias	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g09875	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g12731	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006397	No alias	not classified & original description: CDS=135-740	0.05	OrthoFinder output from all 47 species
Solyc03g093360.3.1	Solyc03g093360	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Solyc03g096460.4.1	Solyc03g096460	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.11	OrthoFinder output from all 47 species
Solyc03g096540.3.1	Solyc03g096540	PLAT domain-containing protein 2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc03g096545.1.1	Solyc03g096545	PLAT domain-containing protein 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Spa_g12962	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24598	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009694	jasmonic acid metabolic process	None	Extended
BP	GO:0009695	jasmonic acid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005819	spindle	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008446	GDP-mannose 4,6-dehydratase activity	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0010029	regulation of seed germination	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010274	hydrotropism	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
CC	GO:0032541	cortical endoplasmic reticulum	IEP	HCCA
CC	GO:0042807	central vacuole	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	HCCA
BP	GO:1900140	regulation of seedling development	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001024	PLAT/LH2_dom	33	152

External Links

No external refs found!

AT2G22170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation