AT2G22120

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG0001516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001516_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22120

Target	Alias	Description	ECC score	Gene Family Method
Adi_g087299	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g12883	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009539	No alias	E3 ubiquitin ligase & original description: CDS=89-1339	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	35	82

External Links

No external refs found!