1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G21540

AT2G21540 (SFH3, ATSFH3)


Aliases : SFH3, ATSFH3

Description : SEC14-like 3


Gene families : OG0000242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G21540
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00130910 evm_27.TU.AmTr_v1... Phosphatidylinositol/phosphatidylcholine transfer... 0.08 OrthoFinder output from all 47 species
AT2G18180 No alias Sec14p-like phosphatidylinositol transfer family protein 0.05 OrthoFinder output from all 47 species
AT4G34580 COW1, SRH1 Sec14p-like phosphatidylinositol transfer family protein 0.05 OrthoFinder output from all 47 species
AT4G36490 ATSFH12, SFH12 SEC14-like 12 0.05 OrthoFinder output from all 47 species
Als_g05532 SFH3, ATSFH3 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Als_g15840 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Aop_g01666 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04520 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G028100.1 ATSFH12, SFH12,... phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G022900.1 Ceric.06G022900 phosphoinositide transfer protein *(SFH) & original... 0.05 OrthoFinder output from all 47 species
Dac_g14392 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Dac_g21858 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04801 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08519 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09956 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01018887001 ATSFH12, SFH12 Phosphatidylinositol/phosphatidylcholine transfer... 0.05 OrthoFinder output from all 47 species
LOC_Os02g04030.1 ATSFH12, SFH12,... Phosphatidylinositol/phosphatidylcholine transfer... 0.09 OrthoFinder output from all 47 species
LOC_Os02g24430.1 SFH3, ATSFH3,... Phosphatidylinositol/phosphatidylcholine transfer... 0.07 OrthoFinder output from all 47 species
Len_g08273 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Len_g24313 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Msp_g13043 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13228 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g15143 No alias phosphoinositide transfer protein *(SFH) & original... 0.05 OrthoFinder output from all 47 species
Ore_g10371 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05023 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g15850 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62693 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g109860.3.1 ATSFH12, SFH12,... Phosphatidylinositol/phosphatidylcholine transfer... 0.08 OrthoFinder output from all 47 species
Solyc10g053900.2.1 SFH3, ATSFH3,... Phosphatidylinositol/phosphatidylcholine transfer... 0.09 OrthoFinder output from all 47 species
Solyc11g040280.2.1 Solyc11g040280 Phosphatidylinositol/phosphatidylcholine transfer... 0.08 OrthoFinder output from all 47 species
Spa_g01317 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Spa_g14999 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.06 OrthoFinder output from all 47 species
Tin_g19836 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Tin_g19865 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013582_P001 Zm00001e013582 Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Zm00001e013583_P003 ATSFH12, SFH12,... Phosphatidylinositol/phosphatidylcholine transfer... 0.1 OrthoFinder output from all 47 species
Zm00001e025323_P002 Zm00001e025323 Phosphatidylinositol/phosphatidylcholine transfer... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0006810 transport ISS Interproscan
MF GO:0008526 phosphatidylinositol transfer activity IGI Interproscan
MF GO:0008526 phosphatidylinositol transfer activity ISS Interproscan
BP GO:0009908 flower development IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 140 306
IPR011074 CRAL/TRIO_N_dom 89 116
No external refs found!