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  5. AT2G21400

AT2G21400 (SRS3)


Aliases : SRS3

Description : SHI-related sequence3


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G21400

Target Alias Description ECC score Gene Family Method Actions
AT1G19790 SRS7 SHI-related sequence 7 0.03 OrthoFinder output from all 47 species
Aev_g17440 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26941 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13440 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02264 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013486001 LRP1 RNA biosynthesis.transcriptional activation.SRS... 0.05 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72490.1 LRP1, LOC_Os01g72490 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Mp3g19510.1 SHI transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0010053 root epidermal cell differentiation IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA

No InterPro domains available for this sequence

No external refs found!