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AT2G20280


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG0004039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G20280

Target Alias Description ECC score Gene Family Method Actions
Als_g12973 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aob_g08343 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G076400.1 Ceric.01G076400 regulatory protein of RNA homeostasis & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.66 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Dde_g04801 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
MA_10434309g0010 No alias C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Ore_g03565 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g06852 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Smo80672 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.06 OrthoFinder output from all 47 species
Solyc09g007230.3.1 Solyc09g007230 C3H zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e019376_P001 Zm00001e019376 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032378 ZC3H15/TMA46_C 217 296
No external refs found!