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  5. AT2G19240

AT2G19240


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0001521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G19240
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Aob_g14100 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01790.t1 Aspi01Gene01790 Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02267.t1 Aspi01Gene02267 Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02275.t1 Aspi01Gene02275 Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02281.t1 Aspi01Gene02281 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02303.t1 Aspi01Gene02303 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02303.t2 Aspi01Gene02303 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02421.t1 Aspi01Gene02421 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02422.t1 Aspi01Gene02422 Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02477.t1 Aspi01Gene02477 Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02487.t1 Aspi01Gene02487 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02488.t1 Aspi01Gene02488 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02539.t1 Aspi01Gene02539 Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02545.t1 Aspi01Gene02545 Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02565.t1 Aspi01Gene02565 Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02584.t2 Aspi01Gene02584 Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.04G023700.1 Ceric.04G023700 Rab GTPase-activating protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g06558 No alias Rab GTPase-activating protein & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23061 No alias Rab GTPase-activating protein & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21512 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12171 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11361 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10561 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Smo403640 No alias Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Tin_g15576 No alias Rab GTPase-activaTing protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000795 synaptonemal complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 102 356
No external refs found!