AT2G19110 (ATHMA4, HMA4)

Aliases : ATHMA4, HMA4

Description : heavy metal atpase 4

Gene families : OG0001874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001874_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G19110

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019873	ATHMA4, HMA4	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.01	OrthoFinder output from all 47 species
Gb_16135	ATHMA2, HMA2	P1B-type heavy metal cation-transporting ATPase (HMA)	0.02	OrthoFinder output from all 47 species
Gb_30489	ATHMA2, HMA2	P1B-type heavy metal cation-transporting ATPase (HMA)	0.01	OrthoFinder output from all 47 species
MA_10434428g0010	ATHMA2, HMA2	P1B-type heavy metal cation-transporting ATPase (HMA)	0.02	OrthoFinder output from all 47 species
Nbi_g25206	ATHMA2, HMA2	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Sam_g16137	No alias	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005385	zinc ion transmembrane transporter activity	IGI	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005886	plasma membrane	TAS	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006829	zinc ion transport	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	IMP	Interproscan
BP	GO:0010043	response to zinc ion	IMP	Interproscan
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015086	cadmium ion transmembrane transporter activity	IGI	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015434	ABC-type cadmium transporter activity	ISS	Interproscan
BP	GO:0015691	cadmium ion transport	IMP	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IMP	Interproscan
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032025	response to cobalt ion	IMP	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
BP	GO:0046686	response to cadmium ion	IMP	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055069	zinc ion homeostasis	IGI	Interproscan
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007131	reciprocal meiotic recombination	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010036	response to boron-containing substance	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015301	obsolete anion:anion antiporter activity	IEP	HCCA
MF	GO:0015562	efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0035825	homologous recombination	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0046713	borate transport	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0080029	cellular response to boron-containing substance levels	IEP	HCCA
MF	GO:0080139	borate efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:0140527	reciprocal homologous recombination	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G19110 (ATHMA4, HMA4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation