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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG0006045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006045_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G18940 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g16931 | No alias | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004808 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | IEP | HCCA |
| BP | GO:0006949 | syncytium formation | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0010118 | stomatal movement | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0048316 | seed development | IEP | HCCA |
| BP | GO:0048608 | reproductive structure development | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 734 | 783 |
| IPR002885 | Pentatricopeptide_repeat | 525 | 573 |
| IPR002885 | Pentatricopeptide_repeat | 419 | 466 |
| IPR002885 | Pentatricopeptide_repeat | 350 | 397 |
| IPR002885 | Pentatricopeptide_repeat | 197 | 258 |
| IPR002885 | Pentatricopeptide_repeat | 268 | 328 |
| IPR002885 | Pentatricopeptide_repeat | 623 | 678 |
| IPR002885 | Pentatricopeptide_repeat | 697 | 728 |
| IPR002885 | Pentatricopeptide_repeat | 486 | 518 |
| No external refs found! |