AT2G18650 (MEE16)

Aliases : MEE16

Description : RING/U-box superfamily protein

Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G18650
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Aob_g04035	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Aop_g06652	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene54627.t1	Aspi01Gene54627	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Ceric.38G004700.1	Ceric.38G004700	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
GSVIVT01019530001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
LOC_Os01g53500.1	LOC_Os01g53500	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_8338g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Ore_g27151	No alias	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Solyc06g007230.2.1	ATL2, TL2, Solyc06g007230	RING-H2-class E3 ligase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0080167	response to karrikin	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	125	168

External Links

No external refs found!