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  5. AT2G18640

AT2G18640 (GGPS4)


Aliases : GGPS4

Description : geranylgeranyl pyrophosphate synthase 4


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G18640

Target Alias Description ECC score Gene Family Method Actions
AT3G32040 No alias Terpenoid synthases superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g07178 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aspi01Gene42399.t1 GGPS1, Aspi01Gene42399 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dac_g17913 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dcu_g15213 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
MA_10429756g0010 GGPS1 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Pir_g57960 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024360 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Solyc04g079960.1.1 GGPS1, Solyc04g079960 catalytic subunit of geranyl diphosphate synthase... 0.03 OrthoFinder output from all 47 species
Solyc11g011240.1.1 GGPS1, Solyc11g011240 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Spa_g07274 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Tin_g06440 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004311 farnesyltranstransferase activity IDA Interproscan
MF GO:0004311 farnesyltranstransferase activity IGI Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0008299 isoprenoid biosynthetic process ISS Interproscan
BP GO:0008299 isoprenoid biosynthetic process TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 108 342
No external refs found!