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  5. AT2G17140

AT2G17140


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0022429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0022429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G17140
Cluster HCCA: Cluster_97


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0030371 translation repressor activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034635 glutathione transport IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0072337 modified amino acid transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 215 264
IPR002885 Pentatricopeptide_repeat 328 373
IPR002885 Pentatricopeptide_repeat 627 676
IPR002885 Pentatricopeptide_repeat 110 159
IPR002885 Pentatricopeptide_repeat 394 441
IPR002885 Pentatricopeptide_repeat 557 604
IPR002885 Pentatricopeptide_repeat 736 763
IPR002885 Pentatricopeptide_repeat 176 209
IPR002885 Pentatricopeptide_repeat 519 550
IPR002885 Pentatricopeptide_repeat 461 493
IPR002885 Pentatricopeptide_repeat 289 315
No external refs found!