AT2G16810

Description : F-box and associated interaction domains-containing protein

Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G16810

Target	Alias	Description	ECC score	Gene Family Method
AT1G23037	No alias	F-box associated ubiquitination effector family protein	0.07	OrthoFinder output from all 47 species
AT1G26515	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT1G30780	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from all 47 species
AT1G30790	No alias	F-box and associated interaction domains-containing protein	0.12	OrthoFinder output from all 47 species
AT1G30920	No alias	F-box family protein	0.03	OrthoFinder output from all 47 species
AT1G31090	No alias	F-box family protein	0.05	OrthoFinder output from all 47 species
AT1G31163	No alias	F-box associated ubiquitination effector family protein	0.09	OrthoFinder output from all 47 species
AT1G31620	No alias	unknown protein; Has 9 Blast hits to 9 proteins in 2...	0.1	OrthoFinder output from all 47 species
AT1G32420	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT1G32660	No alias	F-box and associated interaction domains-containing protein	0.13	OrthoFinder output from all 47 species
AT1G46840	No alias	F-box family protein	0.12	OrthoFinder output from all 47 species
AT1G46912	No alias	F-box associated ubiquitination effector family protein	0.02	OrthoFinder output from all 47 species
AT1G47350	No alias	F-box associated ubiquitination effector family protein	0.04	OrthoFinder output from all 47 species
AT1G47730	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from all 47 species
AT1G47765	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT1G47810	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT1G50880	No alias	F-box and associated interaction domains-containing protein	0.1	OrthoFinder output from all 47 species
AT1G53360	No alias	F-box associated ubiquitination effector family protein	0.15	OrthoFinder output from all 47 species
AT1G53370	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT1G59690	No alias	F-box associated ubiquitination effector family protein	0.03	OrthoFinder output from all 47 species
AT1G61060	No alias	F-box family protein	0.06	OrthoFinder output from all 47 species
AT1G67130	No alias	F-box family protein	0.09	OrthoFinder output from all 47 species
AT2G13630	No alias	F-box associated ubiquitination effector family protein	0.02	OrthoFinder output from all 47 species
AT2G16220	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT2G16450	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from all 47 species
AT2G19630	No alias	F-box and associated interaction domains-containing protein	0.05	OrthoFinder output from all 47 species
AT2G23160	No alias	F-box family protein	0.09	OrthoFinder output from all 47 species
AT2G31470	DOR	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from all 47 species
AT2G32470	No alias	F-box associated ubiquitination effector family protein	0.18	OrthoFinder output from all 47 species
AT3G04660	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from all 47 species
AT3G10240	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from all 47 species
AT3G49440	No alias	F-box associated ubiquitination effector family protein	0.08	OrthoFinder output from all 47 species
AT3G52320	No alias	F-box and associated interaction domains-containing protein	0.11	OrthoFinder output from all 47 species
AT3G57580	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT3G61340	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT4G09190	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT4G19930	No alias	F-box and associated interaction domains-containing protein	0.07	OrthoFinder output from all 47 species
AT4G19940	No alias	F-box and associated interaction domains-containing protein	0.03	OrthoFinder output from all 47 species
AT4G29970	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from all 47 species
AT4G38870	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT5G18160	No alias	F-box and associated interaction domains-containing protein	0.04	OrthoFinder output from all 47 species
AT5G22791	No alias	F-box family protein	0.05	OrthoFinder output from all 47 species
AT5G42430	No alias	F-box and associated interaction domains-containing protein	0.08	OrthoFinder output from all 47 species
AT5G44345	No alias	F-box associated ubiquitination effector family protein	0.11	OrthoFinder output from all 47 species
AT5G50220	No alias	F-box family protein	0.17	OrthoFinder output from all 47 species
AT5G52610	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT5G52620	No alias	F-box associated ubiquitination effector family protein	0.1	OrthoFinder output from all 47 species
AT5G62060	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT5G62660	No alias	F-box and associated interaction domains-containing protein	0.06	OrthoFinder output from all 47 species
AT5G65850	No alias	F-box and associated interaction domains-containing protein	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013187	F-box-assoc_dom_typ3	242	278
IPR001810	F-box_dom	42	79

External Links

No external refs found!

AT2G16810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation