Aliases : ATARFB1A, ARFB1A
Description : ADP-ribosylation factor B1A
Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT2G15310 | |
Cluster | HCCA: Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g051594 | ATARFA1B, ARFA1B | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g30565 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g07699 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene42739.t1 | ATARFA1F,... | ARF-GTPase *(ARF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0170.g055577 | No alias | not classified & original description: CDS=1-285 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s1372.g102367 | No alias | not classified & original description: CDS=1-285 | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g486250 | ARFA1E, ATARFA1E | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01000224001 | ATARFA1F, ARFA1F | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.07 | OrthoFinder output from all 47 species | |
Gb_01291 | ARFA1E, ATARFA1E | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species | |
Gb_01521 | ATARFA1F, ARFA1F | ARF-GTPase | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g28928 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g31478 | ATARFA1F, ARFA1F | ARF-GTPase *(ARF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g36422 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_101085g0010 | ARFA1E, ATARFA1E | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
MA_9401071g0010 | ATARFA1F, ARFA1F | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
Mp3g13920.1 | ATARFA1F, ARFA1F | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species | |
Msp_g28749 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g45314 | ATARFA1B, ARFA1B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g01985 | No alias | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g09167 | No alias | ARF-GTPase *(ARF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g092970.3.1 | ATARF1, ARF1,... | ARF-GTPase | 0.04 | OrthoFinder output from all 47 species | |
Spa_g11383 | ATARFB1B, ARFB1B | ARF-GTPase *(ARFA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011790_P001 | ATARFA1B,... | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023300_P004 | ATARFB1B,... | ARF-GTPase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e033127_P003 | ARF1A1C, Zm00001e033127 | ARF-GTPase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005525 | GTP binding | ISS | Interproscan |
BP | GO:0006499 | N-terminal protein myristoylation | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003008 | system process | IEP | HCCA |
BP | GO:0003013 | circulatory system process | IEP | HCCA |
BP | GO:0003018 | vascular process in circulatory system | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005242 | inward rectifier potassium channel activity | IEP | HCCA |
MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005249 | voltage-gated potassium channel activity | IEP | HCCA |
MF | GO:0005267 | potassium channel activity | IEP | HCCA |
MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006865 | amino acid transport | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0008643 | carbohydrate transport | IEP | HCCA |
BP | GO:0010232 | vascular transport | IEP | HCCA |
BP | GO:0010233 | phloem transport | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | HCCA |
MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | HCCA |
MF | GO:0015172 | acidic amino acid transmembrane transporter activity | IEP | HCCA |
MF | GO:0015175 | neutral L-amino acid transmembrane transporter activity | IEP | HCCA |
MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015293 | symporter activity | IEP | HCCA |
MF | GO:0015294 | solute:monoatomic cation symporter activity | IEP | HCCA |
MF | GO:0015295 | solute:proton symporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0015749 | monosaccharide transmembrane transport | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
MF | GO:0022843 | voltage-gated monoatomic cation channel activity | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
MF | GO:0030551 | cyclic nucleotide binding | IEP | HCCA |
BP | GO:0034219 | carbohydrate transmembrane transport | IEP | HCCA |
MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | HCCA |
MF | GO:0051119 | sugar transmembrane transporter activity | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0072348 | sulfur compound transport | IEP | HCCA |
MF | GO:0090448 | glucosinolate:proton symporter activity | IEP | HCCA |
BP | GO:0090449 | phloem glucosinolate loading | IEP | HCCA |
MF | GO:0099094 | ligand-gated monoatomic cation channel activity | IEP | HCCA |
BP | GO:0110126 | phloem loading | IEP | HCCA |
BP | GO:1901349 | glucosinolate transport | IEP | HCCA |
MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006689 | Small_GTPase_ARF/SAR | 8 | 176 |
No external refs found! |