AT2G15310 (ATARFB1A, ARFB1A)


Aliases : ATARFB1A, ARFB1A

Description : ADP-ribosylation factor B1A


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G15310
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Adi_g051594 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30565 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07699 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42739.t1 ATARFA1F,... ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0170.g055577 No alias not classified & original description: CDS=1-285 0.02 OrthoFinder output from all 47 species
Azfi_s1372.g102367 No alias not classified & original description: CDS=1-285 0.02 OrthoFinder output from all 47 species
Cre12.g486250 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
GSVIVT01000224001 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.07 OrthoFinder output from all 47 species
Gb_01291 ARFA1E, ATARFA1E ARF-GTPase 0.03 OrthoFinder output from all 47 species
Gb_01521 ATARFA1F, ARFA1F ARF-GTPase 0.04 OrthoFinder output from all 47 species
Lfl_g28928 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31478 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36422 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_101085g0010 ARFA1E, ATARFA1E ARF-GTPase 0.02 OrthoFinder output from all 47 species
MA_9401071g0010 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Mp3g13920.1 ATARFA1F, ARFA1F ARF-GTPase 0.03 OrthoFinder output from all 47 species
Msp_g28749 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g45314 ATARFA1B, ARFA1B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g01985 No alias ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09167 No alias ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g092970.3.1 ATARF1, ARF1,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Spa_g11383 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011790_P001 ATARFA1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e023300_P004 ATARFB1B,... ARF-GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e033127_P003 ARF1A1C, Zm00001e033127 ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
BP GO:0006499 N-terminal protein myristoylation IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0003008 system process IEP HCCA
BP GO:0003013 circulatory system process IEP HCCA
BP GO:0003018 vascular process in circulatory system IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005242 inward rectifier potassium channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0010232 vascular transport IEP HCCA
BP GO:0010233 phloem transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP HCCA
MF GO:0015175 neutral L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:0090448 glucosinolate:proton symporter activity IEP HCCA
BP GO:0090449 phloem glucosinolate loading IEP HCCA
MF GO:0099094 ligand-gated monoatomic cation channel activity IEP HCCA
BP GO:0110126 phloem loading IEP HCCA
BP GO:1901349 glucosinolate transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 176
No external refs found!