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AT2G04350 (LACS8)


Aliases : LACS8

Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0001695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G04350

Target Alias Description ECC score Gene Family Method Actions
Ore_g34760 LACS9 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Smo141243 LACS9 Long chain acyl-CoA synthetase 9, chloroplastic... 0.03 OrthoFinder output from all 47 species
Smo96881 LACS9 Long chain acyl-CoA synthetase 9, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc12g009040.3.1 LACS8, Solyc12g009040 Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process ISS Interproscan
MF GO:0004467 long-chain fatty acid-CoA ligase activity IDA Interproscan
MF GO:0004467 long-chain fatty acid-CoA ligase activity ISS Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006631 fatty acid metabolic process TAS Interproscan
BP GO:0006633 fatty acid biosynthetic process ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009757 hexose mediated signaling IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010255 glucose mediated signaling pathway IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 123 588
No external refs found!