AT2G04280

Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12700.1); Has 130 Blast hits to 130 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

Gene families : OG0002790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002790_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G04280

Target	Alias	Description	ECC score	Gene Family Method
Adi_g024541	SUB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g10342	SUB1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g03508	SUB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01030123001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Ppi_g15869	SUB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo84756	SUB1	No description available	0.03	OrthoFinder output from all 47 species
Solyc07g045210.1.1	Solyc07g045210	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e035640_P002	SUB1, Zm00001e035640	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007020	microtubule nucleation	RCA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	ISM	Interproscan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0005319	lipid transporter activity	IEP	HCCA
MF	GO:0005548	phospholipid transporter activity	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005881	cytoplasmic microtubule	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008526	phosphatidylinositol transfer activity	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
CC	GO:0010005	cortical microtubule, transverse to long axis	IEP	HCCA
BP	GO:0010031	circumnutation	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0050879	multicellular organismal movement	IEP	HCCA
CC	GO:0055028	cortical microtubule	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA
MF	GO:0120014	phospholipid transfer activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G04280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation