1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G04170

AT2G04170


Description : TRAF-like family protein


Gene families : OG0008618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008618_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G04170

Target Alias Description ECC score Gene Family Method Actions
AT1G65150 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT2G04190 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT3G20380 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT3G28220 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT4G09780 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT5G26280 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT5G26290 No alias TRAF-like family protein 0.06 OrthoFinder output from all 47 species
AT5G26300 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT5G26320 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01037800001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 136 261
IPR002083 MATH/TRAF_dom 290 409
No external refs found!