AT2G02990 (ATRNS1, RNS1)

Aliases : ATRNS1, RNS1

Description : ribonuclease 1

Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02990

Target	Alias	Description	ECC score	Gene Family Method
Ceric.22G006700.1	ATRNS1, RNS1,...	T2-type RNase *(RNS) & original description:...	0.04	OrthoFinder output from all 47 species
Gb_38141	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
LOC_Os07g43600.1	ATRNS1, RNS1,...	Intracellular ribonuclease LX OS=Solanum lycopersicum...	0.07	OrthoFinder output from all 47 species
MA_95383g0020	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp1g07230.1	RNS2	Ribonuclease 2 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Solyc05g007940.3.1	ATRNS1, RNS1,...	Intracellular ribonuclease LX OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	ISS	Interproscan
MF	GO:0004540	ribonuclease activity	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IDA	Interproscan
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007568	aging	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009611	response to wounding	IEP	Interproscan
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IMP	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015804	neutral amino acid transport	None	Extended
BP	GO:0015824	proline transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	IEP	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001568	RNase_T2-like	30	213

External Links

No external refs found!

AT2G02990 (ATRNS1, RNS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation