Description : 4'-phosphopantetheinyl transferase superfamily
Gene families : OG0012897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012897_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT2G02770 | |
Cluster | HCCA: Cluster_67 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G30060 | No alias | COP1-interacting protein-related | 0.07 | OrthoFinder output from all 47 species | |
AT2G01800 | No alias | COP1-interacting protein-related | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021023_P001 | Zm00001e021023 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | ISM | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
MF | GO:0008327 | methyl-CpG binding | IEP | HCCA |
BP | GO:0009566 | fertilization | IEP | HCCA |
BP | GO:0009567 | double fertilization forming a zygote and endosperm | IEP | HCCA |
BP | GO:0010424 | DNA methylation on cytosine within a CG sequence | IEP | HCCA |
MF | GO:0010428 | methyl-CpNpG binding | IEP | HCCA |
MF | GO:0010429 | methyl-CpNpN binding | IEP | HCCA |
BP | GO:0022414 | reproductive process | IEP | HCCA |
BP | GO:0031445 | regulation of heterochromatin formation | IEP | HCCA |
BP | GO:0031453 | positive regulation of heterochromatin formation | IEP | HCCA |
CC | GO:0031982 | vesicle | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0032776 | DNA methylation on cytosine | IEP | HCCA |
BP | GO:0032879 | regulation of localization | IEP | HCCA |
BP | GO:0032880 | regulation of protein localization | IEP | HCCA |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | HCCA |
BP | GO:0048240 | sperm capacitation | IEP | HCCA |
BP | GO:0048445 | carpel morphogenesis | IEP | HCCA |
BP | GO:0048449 | floral organ formation | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
BP | GO:0051302 | regulation of cell division | IEP | HCCA |
BP | GO:0060341 | regulation of cellular localization | IEP | HCCA |
BP | GO:0080154 | regulation of fertilization | IEP | HCCA |
BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | HCCA |
BP | GO:0090308 | regulation of DNA methylation-dependent heterochromatin formation | IEP | HCCA |
BP | GO:0090309 | positive regulation of DNA methylation-dependent heterochromatin formation | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
BP | GO:0120261 | regulation of heterochromatin organization | IEP | HCCA |
BP | GO:0120263 | positive regulation of heterochromatin organization | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1902275 | regulation of chromatin organization | IEP | HCCA |
BP | GO:1905269 | positive regulation of chromatin organization | IEP | HCCA |
BP | GO:1905393 | plant organ formation | IEP | HCCA |
BP | GO:2000008 | regulation of protein localization to cell surface | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
BP | GO:2001252 | positive regulation of chromosome organization | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR008278 | 4-PPantetheinyl_Trfase_dom | 449 | 547 |
No external refs found! |