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AT2G02010 (GAD4)


Aliases : GAD4

Description : glutamate decarboxylase 4


Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G02010
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142920 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00144920 GAD5,... Glutamate decarboxylase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00145270 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.03 OrthoFinder output from all 47 species
Dac_g03311 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01418 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10197 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39486 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11785 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35431 GAD5 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g13300.1 GAD, GAD1, LOC_Os03g13300 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os04g37500.1 GAD, GAD1, LOC_Os04g37500 glutamate decarboxylase 0.05 OrthoFinder output from all 47 species
LOC_Os08g36320.1 GAD, GAD1, LOC_Os08g36320 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Mp3g23860.1 GAD, GAD1 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Ore_g06503 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10261 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04493 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020087 GAD4 glutamate decarboxylase *(GAD) & original description:... 0.02 OrthoFinder output from all 47 species
Solyc03g098240.3.1 GAD, GAD1, Solyc03g098240 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc04g025530.3.1 GAD4, Solyc04g025530 glutamate decarboxylase 0.07 OrthoFinder output from all 47 species
Solyc11g011920.2.1 GAD, GAD1, Solyc11g011920 glutamate decarboxylase 0.04 OrthoFinder output from all 47 species
Spa_g05104 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g08648 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005503_P001 GAD, GAD1, Zm00001e005503 glutamate decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
BP GO:0006522 alanine metabolic process IEP HCCA
BP GO:0006524 alanine catabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0009051 pentose-phosphate shunt, oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009078 pyruvate family amino acid metabolic process IEP HCCA
BP GO:0009080 pyruvate family amino acid catabolic process IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0019481 L-alanine catabolic process, by transamination IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042851 L-alanine metabolic process IEP HCCA
BP GO:0042853 L-alanine catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 33 381
No external refs found!