AT2G01940 (ATIDD15, SGR5)

Aliases : ATIDD15, SGR5

Description : C2H2-like zinc finger protein

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G01940

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020457	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g37976	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aop_g21518	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g04941	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g03412	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01009680001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	OrthoFinder output from all 47 species
GSVIVT01025166001	JKD	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
Gb_03909	AtIDD7, IDD7	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species
Gb_17209	IDD16, AtIDD16	C2H2 zinc finger transcription factor	0.01	OrthoFinder output from all 47 species
LOC_Os07g39310.1	MGP, LOC_Os07g39310	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Pnu_g22200	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ppi_g07601	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc04g008500.4.1	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g15231	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.01	OrthoFinder output from all 47 species
Spa_g39904	MGP	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Tin_g35610	IDD16, AtIDD16	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e004751_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e018716_P001	MGP, Zm00001e018716	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009581	detection of external stimulus	None	Extended
BP	GO:0009582	detection of abiotic stimulus	None	Extended
BP	GO:0009590	detection of gravity	IMP	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009959	negative gravitropism	IMP	Interproscan
BP	GO:0010031	circumnutation	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032881	regulation of polysaccharide metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050879	multicellular organismal movement	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000904	regulation of starch metabolic process	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G01940 (ATIDD15, SGR5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation