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AT2G01860 (EMB975)


Aliases : EMB975

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0008849 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G01860

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0331.g065404 EMB975 not classified & original description: CDS=1-1374 0.06 OrthoFinder output from all 47 species
LOC_Os02g02590.1 EMB975, LOC_Os02g02590 Pentatricopeptide repeat-containing protein At2g01860... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000304 response to singlet oxygen IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008219 cell death IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 436 463
IPR002885 Pentatricopeptide_repeat 350 408
No external refs found!