Aliases : RAD23B, RAD23
Description : Rad23 UV excision repair protein family
Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene47362.t1 | RAD23B, RAD23,... | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g33340.1 | RAD23D, LOC_Os08g33340 | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g09383 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e025088_P005 | RAD23B, RAD23,... | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006259 | DNA metabolic process | RCA | Interproscan |
BP | GO:0006284 | base-excision repair | ISS | Interproscan |
BP | GO:0033044 | regulation of chromosome organization | RCA | Interproscan |
MF | GO:0043130 | ubiquitin binding | IDA | Interproscan |
MF | GO:0070628 | proteasome binding | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000003 | reproduction | IEP | HCCA |
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
BP | GO:0002229 | defense response to oomycetes | IEP | HCCA |
BP | GO:0002239 | response to oomycetes | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004407 | histone deacetylase activity | IEP | HCCA |
CC | GO:0005874 | microtubule | IEP | HCCA |
CC | GO:0005876 | spindle microtubule | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
BP | GO:0009314 | response to radiation | IEP | HCCA |
BP | GO:0009416 | response to light stimulus | IEP | HCCA |
CC | GO:0009524 | phragmoplast | IEP | HCCA |
BP | GO:0010431 | seed maturation | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016458 | obsolete gene silencing | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0019213 | deacetylase activity | IEP | HCCA |
BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
BP | GO:0032504 | multicellular organism reproduction | IEP | HCCA |
MF | GO:0033558 | protein lysine deacetylase activity | IEP | HCCA |
BP | GO:0034635 | glutathione transport | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
BP | GO:0042732 | D-xylose metabolic process | IEP | HCCA |
BP | GO:0042939 | tripeptide transport | IEP | HCCA |
BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
BP | GO:0048451 | petal formation | IEP | HCCA |
BP | GO:0048453 | sepal formation | IEP | HCCA |
MF | GO:0051011 | microtubule minus-end binding | IEP | HCCA |
BP | GO:0072337 | modified amino acid transport | IEP | HCCA |
BP | GO:0072348 | sulfur compound transport | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
CC | GO:0099080 | supramolecular complex | IEP | HCCA |
CC | GO:0099081 | supramolecular polymer | IEP | HCCA |
CC | GO:0099512 | supramolecular fiber | IEP | HCCA |
CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | HCCA |
No external refs found! |